.. AUTO-GENERATED FILE -- DO NOT EDIT! :mod:`nicom` ============ .. automodule:: nibabel.nicom .. currentmodule:: nibabel.nicom .. autosummary:: .. AUTO-GENERATED FILE -- DO NOT EDIT! Module: :mod:`nicom.ascconv` ---------------------------- .. automodule:: nibabel.nicom.ascconv .. currentmodule:: nibabel.nicom.ascconv .. autosummary:: AscconvParseError Atom NoValue assign2atoms obj_from_atoms parse_ascconv .. AUTO-GENERATED FILE -- DO NOT EDIT! Module: :mod:`nicom.csareader` ------------------------------ .. automodule:: nibabel.nicom.csareader .. currentmodule:: nibabel.nicom.csareader .. autosummary:: CSAError CSAReadError get_acq_mat_txt get_b_matrix get_b_value get_csa_header get_g_vector get_ice_dims get_n_mosaic get_scalar get_slice_normal get_vector is_mosaic nt_str read .. AUTO-GENERATED FILE -- DO NOT EDIT! Module: :mod:`nicom.dicomreaders` --------------------------------- .. automodule:: nibabel.nicom.dicomreaders .. currentmodule:: nibabel.nicom.dicomreaders .. autosummary:: DicomReadError mosaic_to_nii read_mosaic_dir read_mosaic_dwi_dir slices_to_series .. AUTO-GENERATED FILE -- DO NOT EDIT! Module: :mod:`nicom.dicomwrappers` ---------------------------------- .. automodule:: nibabel.nicom.dicomwrappers .. currentmodule:: nibabel.nicom.dicomwrappers .. autosummary:: MosaicWrapper MultiframeWrapper SiemensWrapper Wrapper WrapperError WrapperPrecisionError none_or_close wrapper_from_data wrapper_from_file .. AUTO-GENERATED FILE -- DO NOT EDIT! Module: :mod:`nicom.dwiparams` ------------------------------ .. automodule:: nibabel.nicom.dwiparams .. currentmodule:: nibabel.nicom.dwiparams .. autosummary:: B2q nearest_pos_semi_def q2bg .. AUTO-GENERATED FILE -- DO NOT EDIT! Module: :mod:`nicom.structreader` --------------------------------- .. automodule:: nibabel.nicom.structreader .. currentmodule:: nibabel.nicom.structreader .. autosummary:: Unpacker .. AUTO-GENERATED FILE -- DO NOT EDIT! Module: :mod:`nicom.utils` -------------------------- .. automodule:: nibabel.nicom.utils .. currentmodule:: nibabel.nicom.utils .. autosummary:: find_private_section .. currentmodule:: nibabel.nicom .. currentmodule:: nibabel.nicom.ascconv :class:`AscconvParseError` ~~~~~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: AscconvParseError :members: :undoc-members: :show-inheritance: .. automethod:: __init__ :class:`Atom` ~~~~~~~~~~~~~ .. autoclass:: Atom :members: :undoc-members: :show-inheritance: .. automethod:: __init__ :class:`NoValue` ~~~~~~~~~~~~~~~~ .. autoclass:: NoValue :members: :undoc-members: :show-inheritance: .. automethod:: __init__ assign2atoms ~~~~~~~~~~~~ .. autofunction:: assign2atoms obj_from_atoms ~~~~~~~~~~~~~~ .. autofunction:: obj_from_atoms parse_ascconv ~~~~~~~~~~~~~ .. autofunction:: parse_ascconv .. currentmodule:: nibabel.nicom.csareader :class:`CSAError` ~~~~~~~~~~~~~~~~~ .. autoclass:: CSAError :members: :undoc-members: :show-inheritance: .. automethod:: __init__ :class:`CSAReadError` ~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: CSAReadError :members: :undoc-members: :show-inheritance: .. automethod:: __init__ get_acq_mat_txt ~~~~~~~~~~~~~~~ .. autofunction:: get_acq_mat_txt get_b_matrix ~~~~~~~~~~~~ .. autofunction:: get_b_matrix get_b_value ~~~~~~~~~~~ .. autofunction:: get_b_value get_csa_header ~~~~~~~~~~~~~~ .. autofunction:: get_csa_header get_g_vector ~~~~~~~~~~~~ .. autofunction:: get_g_vector get_ice_dims ~~~~~~~~~~~~ .. autofunction:: get_ice_dims get_n_mosaic ~~~~~~~~~~~~ .. autofunction:: get_n_mosaic get_scalar ~~~~~~~~~~ .. autofunction:: get_scalar get_slice_normal ~~~~~~~~~~~~~~~~ .. autofunction:: get_slice_normal get_vector ~~~~~~~~~~ .. autofunction:: get_vector is_mosaic ~~~~~~~~~ .. autofunction:: is_mosaic nt_str ~~~~~~ .. autofunction:: nt_str read ~~~~ .. autofunction:: read .. currentmodule:: nibabel.nicom.dicomreaders :class:`DicomReadError` ~~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: DicomReadError :members: :undoc-members: :show-inheritance: .. automethod:: __init__ mosaic_to_nii ~~~~~~~~~~~~~ .. autofunction:: mosaic_to_nii read_mosaic_dir ~~~~~~~~~~~~~~~ .. autofunction:: read_mosaic_dir read_mosaic_dwi_dir ~~~~~~~~~~~~~~~~~~~ .. autofunction:: read_mosaic_dwi_dir slices_to_series ~~~~~~~~~~~~~~~~ .. autofunction:: slices_to_series .. currentmodule:: nibabel.nicom.dicomwrappers :class:`MosaicWrapper` ~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: MosaicWrapper :members: :undoc-members: :show-inheritance: .. automethod:: __init__ :class:`MultiframeWrapper` ~~~~~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: MultiframeWrapper :members: :undoc-members: :show-inheritance: .. automethod:: __init__ :class:`SiemensWrapper` ~~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: SiemensWrapper :members: :undoc-members: :show-inheritance: .. automethod:: __init__ :class:`Wrapper` ~~~~~~~~~~~~~~~~ .. autoclass:: Wrapper :members: :undoc-members: :show-inheritance: .. automethod:: __init__ :class:`WrapperError` ~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: WrapperError :members: :undoc-members: :show-inheritance: .. automethod:: __init__ :class:`WrapperPrecisionError` ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ .. autoclass:: WrapperPrecisionError :members: :undoc-members: :show-inheritance: .. automethod:: __init__ none_or_close ~~~~~~~~~~~~~ .. autofunction:: none_or_close wrapper_from_data ~~~~~~~~~~~~~~~~~ .. autofunction:: wrapper_from_data wrapper_from_file ~~~~~~~~~~~~~~~~~ .. autofunction:: wrapper_from_file .. currentmodule:: nibabel.nicom.dwiparams B2q ~~~ .. autofunction:: B2q nearest_pos_semi_def ~~~~~~~~~~~~~~~~~~~~ .. autofunction:: nearest_pos_semi_def q2bg ~~~~ .. autofunction:: q2bg .. currentmodule:: nibabel.nicom.structreader :class:`Unpacker` ~~~~~~~~~~~~~~~~~ .. autoclass:: Unpacker :members: :undoc-members: :show-inheritance: .. automethod:: __init__ .. currentmodule:: nibabel.nicom.utils find_private_section ~~~~~~~~~~~~~~~~~~~~ .. autofunction:: find_private_section