benchmarks#

Module: benchmarks.bench_array_to_file#

Benchmarks for array_to_file routine

Run benchmarks with:

import nibabel as nib
nib.bench()

Run this benchmark with:

pytest -c <path>/benchmarks/pytest.benchmark.ini <path>/benchmarks/bench_array_to_file.py

bench_array_to_file()

Module: benchmarks.bench_arrayproxy_slicing#

Benchmarks for ArrayProxy slicing of gzipped and non-gzipped files

Run benchmarks with:

import nibabel as nib
nib.bench()

Run this benchmark with:

pytest -c <path>/benchmarks/pytest.benchmark.ini <path>/benchmarks/bench_arrayproxy_slicing.py

bench_arrayproxy_slicing()

Module: benchmarks.bench_fileslice#

Benchmarks for fileslicing

import nibabel as nib nib.bench()

Run this benchmark with:

pytest -c <path>/benchmarks/pytest.benchmark.ini <path>/benchmarks/bench_fileslice.py

bench_fileslice([bytes, file_, gz, bz2, zst])

run_slices(file_like[, repeat, offset, order])

Module: benchmarks.bench_finite_range#

Benchmarks for finite_range routine

Run benchmarks with:

import nibabel as nib
nib.bench()

Run this benchmark with:

pytest -c <path>/benchmarks/pytest.benchmark.ini <path>/benchmarks/bench_finite_range.py

bench_finite_range()

Module: benchmarks.bench_load_save#

Benchmarks for load and save of image arrays

Run benchmarks with:

import nibabel as nib
nib.bench()

Run this benchmark with:

pytest -c <path>/benchmarks/pytest.benchmark.ini <path>/benchmarks/bench_load_save.py

bench_load_save()

Module: benchmarks.butils#

Benchmarking utilities

print_git_title(title)

Prints title string with git hash if possible, and underline

bench_array_to_file#

nibabel.benchmarks.bench_array_to_file.bench_array_to_file()#

bench_arrayproxy_slicing#

nibabel.benchmarks.bench_arrayproxy_slicing.bench_arrayproxy_slicing()#

bench_fileslice#

nibabel.benchmarks.bench_fileslice.bench_fileslice(bytes=True, file_=True, gz=True, bz2=False, zst=True)#

run_slices#

nibabel.benchmarks.bench_fileslice.run_slices(file_like, repeat=3, offset=0, order='F')#

bench_finite_range#

nibabel.benchmarks.bench_finite_range.bench_finite_range()#

bench_load_save#

nibabel.benchmarks.bench_load_save.bench_load_save()#